Replicate Concordance
JL
7/12/2017
TODO
- manual
- automatic X
- with/without QC X
- CV of reps X
- ICC ?
Total number of Control fcs files (currently) = 256
Total number of Control groups (currently) = 32
Percent of parent CV summary
| PANEL_QC | GROUP_MEDIAN_CV | GROUP_MAD_CV |
|---|---|---|
| panel1 QC FALSE | 15.81245 | 15.73180 |
| panel1 QC TRUE | 15.45393 | 15.75656 |
| panel2 QC FALSE | 19.63395 | 22.79972 |
| panel2 QC TRUE | 18.26962 | 19.21649 |
Percent of base population (lymph/PBMC) CV summary
| PANEL_QC | GROUP_MEDIAN_CV | GROUP_MAD_CV |
|---|---|---|
| panel1 QC FALSE | 23.00270 | 19.68120 |
| panel1 QC TRUE | 23.04921 | 19.76405 |
| panel2 QC FALSE | 42.49685 | 49.95808 |
| panel2 QC TRUE | 42.79589 | 51.44493 |
Replicate data clustering
